Examples

Loading and visualizing human data
ImmQuant's inferred cell type quantities for a human gene expression dataset. The predicted quantities are projected on top of an hematopoietic lineage-tree view (left) and a cell quantity matrix viewer (bottom right). In addition, the "Run deconvolution" dialog is open (top right) in order to allow deconvolution of an additional data set.

Visualizing mouse data with the cell-type lineage-tree viewer
ImmQuant's prediction for mouse data. The inferred cell type abundance values are projected on top of the murine hematopoietic lineage-tree. Red/blue color coding indicates an increase/decrease in immune cell type quantities in a given heterogeneous sample.

Visualizing human data with the cell-type quantities matrix viewer
The matrix renders the inferred relative quantities of immune cell types. Red/blue color coding indicates an increase/decrease in cell-type quantities.

Visualizing human data with the comparative viewer
ImmQuant's prediction can be presented as a comparative graph, where the inferred cell type quantities are compared between two desired groups of samples.